mmdleaf
Segment a leaf from the background

The gray scale image to be processed is read.

f = mmreadgray('leaf.tif');

mmshow(f);

f

Although the leaf was pictured on a light background, it is not possible to fully segment the leaf using a simple thresholding

f_low=mmthreshad(f,100);

Warning: converting image from scalar to uint8

f_med=mmthreshad(f,128);

Warning: converting image from scalar to uint8

f_high=mmthreshad(f,160);

Warning: converting image from scalar to uint8

mmshow(f_low);

mmshow(f_med);

mmshow(f_high);

f_low	f_med

f_high

The toggle is a non-linear image enhancement that changes the pixel value to the maximum or the minimum in the neighborhood given by the structure element, depending which one is the nearest value. The result of the toggle is that near the edges, the image is better defined.

f1=mmtoggle(f,mmero(f,mmsedisk(7)),mmdil(f,mmsedisk(7)));

mmshow(f1);

f1

The thresholding can now be applied resulting a good definition of the leaf boarder. Small white spots can be removed by the area open filter.

f2=mmthreshad(f1,100);

Warning: converting image from scalar to uint8

f3=mmareaopen(f2,80);

mmshow(f2);

mmshow(f3);

f2	f3

For illustration, the contour of the segmented leaf is overlayed in red in the original image

f4=mmgradm(f3);

mmshow(f,f4);

f,f4